Pathogenic bacteria are bacteria that can cause disease.
The body is continually exposed to many species of bacteria, including beneficial , which grow on the skin and , and , which grow mainly in the soil and in decomposition matter. The blood and tissue fluids contain nutrients sufficient to sustain the growth of many bacteria. The body has defence mechanisms that enable it to resist microbial invasion of its tissues and give it a natural immune system or innate immunity against many microorganisms.
Pathogenic bacteria are specially adapted and endowed with mechanisms for overcoming the normal body defences, and can invade parts of the body, such as the blood, where bacteria are not normally found. Some pathogens invade only the surface epithelium, skin or mucous membrane, but many travel more deeply, spreading through the tissues and disseminating by the lymphatic system and blood streams. In some rare cases a pathogenic microbe can infect an entirely healthy person, but infection usually occurs only if the body's defence mechanisms are damaged by some local trauma or an underlying debilitating disease, such as wounding, intoxication, Chills, fatigue, and malnutrition. In many cases, it is important to differentiate infection and colonization, which is when the bacteria are causing little or no harm.
Caused by Mycobacterium tuberculosis bacteria, one of the with the highest disease burden is tuberculosis, which killed 1.4 million people in 2019, mostly in sub-Saharan Africa. Pathogenic bacteria contribute to other globally important diseases, such as pneumonia, which can be caused by bacteria such as Staphylococcus, Streptococcus and Pseudomonas, and foodborne illnesses, which can be caused by bacteria such as Shigella, Campylobacter, and Salmonella. Pathogenic bacteria also cause infections such as tetanus, typhoid fever, diphtheria, syphilis, and leprosy.
Pathogenic bacteria are also the cause of high infant mortality rates in developing countries. A GBD study estimated the global health death rates from (33) bacterial pathogens, finding such infections contributed to one in 8 deaths (or ~7.7 million deaths), which the second largest cause of death globally in 2019.
Most pathogenic bacteria can be grown in cultures and identified by Gram stain and other methods. Bacteria grown in this way are often tested to find which will be an effective treatment for the infection. For hitherto unknown pathogens, Koch's postulates are the standard to establish a causality between a microbe and a disease.
Other bacteria are opportunistic pathogens and cause disease mainly in people with immunosuppression or cystic fibrosis. Examples of these opportunistic pathogens include Pseudomonas aeruginosa, Burkholderia cenocepacia, and Mycobacterium avium.
Chlamydia are intracellular parasites. These pathogens can cause pneumonia or urinary tract infection and may be involved in coronary heart disease.
Other groups of intracellular bacterial pathogens include Salmonella, Neisseria, Brucella, Mycobacterium, Nocardia, Listeria, Francisella, Legionella, and Yersinia pestis. These can exist intracellularly, but can exist outside host cells.
Bacterial pathogens also require access to carbon and energy sources for growth. To avoid competition with host cells for glucose which is the main energy source used by human cells, many pathogens including the respiratory pathogen Haemophilus influenzae specialise in using other carbon sources such as Lactic acid that are abundant in the human body
| BacillusUnless else specified in boxes then ref is: (2026). 9780781782159, Lippincott Williams & Wilkins. ISBN 9780781782159 |
| Rods | Facultative anaerobic | Extracellular |
| Bartonella |
| Rods | Aerobic | Facultative intracellular |
| Bordetella | Negative | Small coccobacilli | Aerobic | Extracellular |
| Borrelia |
| Spirochete | Anaerobic | Extracellular |
| Brucella |
| Coccobacilli | Aerobic | Intracellular |
| Campylobacter |
| Spiral rods coccoid in older cultures | Microaerophilic | Extracellular |
| Chlamydia and Chlamydophila |
| Small, round, ovoid | Facultative or strictly aerobic | Obligate intracellular |
| Clostridium |
| Large, blunt-ended rods | Obligate anaerobic | Extracellular |
| Corynebacterium | Positive (unevenly) | Rods | Mostly facultative anaerobic | Extracellular |
| Enterococcus |
| Coccus | Facultative Anaerobic | Extracellular |
| Escherichia | Negative | Rods | Facultative anaerobic | Extracellular or Intracellular |
| Francisella |
| Coccobacillus | Strictly aerobic | Facultative intracellular |
| Haemophilus | Negative | Coccobacilli to long and slender filaments | Facultative anaerobic 5 – 10% CO2 | Extracellular |
| Helicobacter | Negative | Spiral rod | Microaerophile | Extracellular |
| Legionella |
| Cocobacilli | Aerobic | Facultative intracellular |
| Leptospira |
| Spirochete | Strictly aerobic | Extracellular |
| Listeria |
| Slender, short rods | Facultative Anaerobic | Facultative intracellular |
| Mycobacterium |
| Long, slender rods | Aerobic | Intracellular |
| Mycoplasma |
| Indistinct 'fried egg' appearance, no cell wall | Mostly facultative anaerobic; M. pneumoniae strictly aerobic | Extracellular |
| Neisseria |
| Kidney bean-shaped | Aerobic | Gonococcus: facultative intracellular N. meningitidis: extracellular |
| Pseudomonas Created: 30 September 2005. Last update: 01 April 2013 |
| Rods | Obligate aerobic | Extracellular |
| Rickettsia |
| Small, rod-like coccobacillary | Aerobic | Obligate intracellular |
| Salmonella |
| Rods | Facultative anaerobic | Facultative intracellular |
| Shigella | Negative | Rods | Facultative anaerobic | Extracellular |
| Staphylococcus |
| Round Coccus | Facultative anaerobic | Extracellular, facultative intracellular |
| Streptococcus |
| Ovoid to spherical | Facultative anaerobic | Extracellular |
| Treponema |
| Spirochete | Aerobic | Extracellular |
| Ureaplasma |
| Indistinct, 'fried egg' appearance, no cell wall | Anaerobic | Extracellular |
| Vibrio | Negative | Spiral with single polar flagellum | Facultative anaerobic | Extracellular |
| Yersinia |
| Small rods | Facultative anaerobe | Intracellular |
| +Species of human pathogenic bacteria | |||||
| Actinomyces israelii | Oral flora | Actinomycosis: painful and cysts MRSA in the mouth, lungs, or gastrointestinal tract. | Prolonged penicillin G and drainage | ||
| Bacillus anthracis | Contact with cattle, sheep, goats and horses Spores enter through inhalation or through abrasions | Anthrax: pulmonary, gastrointestinal and/or cutaneous symptoms. In early infection: Penicillin Doxycycline Ciprofloxacin Raxibacumab | Anthrax vaccine Autoclaving of equipment | ||
| Bacteroides fragilis | Gut flora | in gastrointestinal tract, pelvic cavity and | metronidazole | Wound care Aspiration prevention | |
| Bordetella pertussis | Contact with respiratory droplets expelled by infected human hosts. | Whooping cough Secondary bacterial pneumonia such as erythromycin, before paroxysmal stage | Pertussis vaccine, such as in DPT vaccine | ||
| Borrelia | B. burgdorferi Borrelia garinii Borrelia afzelii | Ixodes hard ticks Reservoir in mice, other small mammals, and birds | Lyme disease
| Doxycycline for adults, amoxicillin for children, ceftriaxone for neurological involvement | Wearing clothing that limits skin exposure to ticks. Insect repellent. Avoid areas where ticks are found. |
| B. recurrentis (2026). 9781259835971, McGraw Hill Education. ISBN 9781259835971 and others | Pediculus humanus corporis body louse ( B. recurrentis only) and Ornithodoros soft ticks | Relapsing fever | Penicillin, tetracycline, doxycycline | Avoid areas where ticks are found Better access to washing facilities Reduce crowding Pesticides | |
| Brucella | Brucella abortus Brucella canis B. melitensis Brucella suis | Direct contact with infected animal Oral, by ingestion of unpasteurized milk or milk products | Brucellosis: mainly fever, muscular pain and | doxycycline streptomycin or gentamicin | |
| Campylobacter jejuni | Fecal–oral from animals (mammals and fowl) Uncooked meat (especially poultry) Contaminated water |
| Treat symptoms Fluoroquinolone such as ciprofloxacin in severe cases | Good hygiene Avoiding contaminated water Pasteurizing milk and milk products Cooking meat (especially poultry) | |
| Chlamydia | C. pneumoniae | Respiratory droplets Atypical pneumonia | Doxycycline Erythromycin None | ||
| C. trachomatis | vaginal sex oral sex anal sex Vertical from mother to newborn(ICN) Direct or contaminated surfaces and flies (trachoma) | Trachoma Neonatal conjunctivitis Neonatal pneumonia Nongonococcal urethritis (NGU) Urethritis Pelvic inflammatory disease Epididymitis Prostatitis Lymphogranuloma venereum (LGV) | Erythromycin (adults) Doxycycline (infants and pregnant women) | Erythromycin or silver nitrate in newborn's eyes Safe sex Abstinence | |
| Chlamydophila psittaci | Inhalation of dust with secretions or feces from birds (e.g. parrots) | Psittacosis, mainly atypical pneumonia | Tetracycline Doxycycline Erythromycin - | ||
| Clostridium | C. botulinum | Spores from soil, persevere in Canning food, smoked fish and honey | Botulism: Mainly muscle weakness and paralysis | Antitoxin Penicillin Hyperbaric oxygen Mechanical ventilation | Proper food preservation techniques |
| C. difficile | Gut flora, overgrowing when other flora is depleted | Pseudomembranous colitis | Discontinuing responsible antibiotic Vancomycin or metronidazole if severe Fecal bacteriotherapy | ||
| C. perfringens | Spores in soil Vaginal flora and gut flora | Anaerobic cellulitis Gas gangrene Acute food poisoning Gas gangrene: Debridement or amputation Hyperbaric medicine High doses of doxycycline or penicillin G and clindamycin Food poisoning: Supportive care is sufficient | Appropriate food handling | ||
| C. tetani | Spores in soil, skin penetration through wounds | Tetanus: | Tetanus immune globulin
Sedatives Muscle relaxants Mechanical ventilation Penicillin or metronidazole | Tetanus vaccine (such as in the DPT vaccine) | |
| Corynebacterium diphtheriae | respiratory droplets part of human flora | Diphtheria: Fever, sore throat and neck swelling, potentially narrowing airways. | Horse serum antitoxin Erythromycin Penicillin | DPT vaccine | |
| Ehrlichia | Ehrlichia canis E. chaffeensis | Dog tick | Ehrlichiosis: headache, Myalgia, and fatigue | ||
| Enterococcus | E. faecalis E. faecium | Part of gut flora, opportunistic or entering through GI tract or urinary system wounds | Bacterial endocarditis, biliary tract infections, urinary tract infections | Ampicillin (combined with aminoglycoside in endocarditis) Vancomycin | No vaccine Hand washing and other nosocomial prevention |
| Escherichia | Escherichia coli (generally) |
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| Enterotoxigenic E. coli (ETEC) |
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| Enteropathogenic E. coli | |||||
| Enteroinvasive E.coli (EIEC) |
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| Enterohemorrhagic (EHEC), including |
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| Francisella tularensis | Tularemia: Fever, ulceration at entry site and/or lymphadenopathy. Page last reviewed: October 26, 2015 Can cause severe pneumonia. | ||||
| Haemophilus influenzae |
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| Helicobacter pylori |
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| Klebsiella pneumoniae |
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| Legionella pneumophila |
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| Leptospira species |
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| Listeria monocytogenes |
| (no vaccine) | |||
| Mycobacterium | M. leprae |
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| M. tuberculosis |
| (difficult, see Tuberculosis treatment for more details)
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| Mycoplasma pneumoniae | |||||
| Neisseria | N. gonorrhoeae |
| (No vaccine)
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| N. meningitidis |
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| Pseudomonas aeruginosa | Opportunistic; Infects damaged tissues or people with immunodeficiency. | Pseudomonas infection:
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| Nocardia asteroides | In soil | Nocardiosis: Pneumonia, endocarditis, keratitis, neurological or lymphocutaneous infection | TMP/SMX | ||
| Rickettsia rickettsii | (no preventive drug or approved vaccine)
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| Salmonella | Salmonella typhi | ||||
| Other Salmonella species
e.g. S. typhimurium |
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| Shigella | Shigella sonnei
S. dysenteriae |
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| Staphylococcus | aureus |
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| epidermidis | Human flora in skin, anterior nares and mucous membranes |
| None | ||
| saprophyticus | Part of normal vaginal flora |
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| Streptococcus | agalactiae | Human flora in vagina, mucous membranes, rectum
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| pneumoniae |
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| pyogenes |
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| viridans | Oral flora, penetration through abrasions |
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| Treponema pallidum subspecies pallidum |
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| Vibrio cholerae |
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| Yersinia pestis | Plague: |
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